CDS

Accession Number TCMCG006C04512
gbkey CDS
Protein Id XP_022572128.1
Location join(25453139..25453292,25453394..25453530,25453657..25453841,25454232..25454283,25454467..25454724,25454837..25455103,25455821..25455948,25456031..25456091,25456199..25456235,25456548..25456786,25460369..25460543,25460637..25460773,25460908..25461092,25461428..25461608,25461695..25461922,25461997..25462088,25462172..25462232,25462339..25462369,25462609..25462865,25462940..25463065,25463162..25463254,25467468..25467578,25467664..25467687)
Gene LOC106439347
GeneID 106439347
Organism Brassica napus

Protein

Length 1072aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_022716407.1
Definition polyadenylate-binding protein-interacting protein 4-like isoform X9 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category A
Description Ctc-interacting domain
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010494        [VIEW IN EMBL-EBI]
GO:0010603        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0022618        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033043        [VIEW IN EMBL-EBI]
GO:0034063        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0035770        [VIEW IN EMBL-EBI]
GO:0036464        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043254        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044087        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070925        [VIEW IN EMBL-EBI]
GO:0071826        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1902115        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAATGGGGAAGATGGAAGCTTGAAGAGGCATTCACGTGATAGTTTAGTGTACCTCACAACATGTATGATTGGGCATCTCGTGGAAGCGCATCTTAAAAATGGATCGGTTTATAGTGGTATATTTCATGCTGCTGATGTGGAGAAGGATTTTGGAATTGTTCTAAAGATGGCATCCCTGGTTAAAGACGGTACTTTACCAGGGCATAAATCTCGTTCCCAGTTTGTCAGAAAGCCACCTTACAAGACATTCATTATTCCTGCGGATGAGCTTGTGCAAGTTGTAGCTAAGGATCTCTCCGTAGTGAGTGACGGCAAGTTAAATGCCGTTCAGAGTGACAAGTCGGGGGAGCTTTTGACGGATTCTTCTATATCGAAGTCTTGTCGTGTTGTTCAGAGAAGCGAGCGAAAACCCAGGGTACTTGACGGTGAAGCTCCTGAGGGTCTGGATAATGTGTTTGATGAGTCTTGCAGAAGTGAAGAACAAGTGCTCAAAGCTACACCTCTAATGGTGTCATCTCAACTAAAGGTTCAAGAAAGTACAAGTCTTGTTCAAACTGTGGAAGAAAAAAATTCGCCCGGCAAGGAATCTGCTGAGGCGTCACCGTCAAGTATGAGTTCAAGTCAGCTGACGTATACGCCTGAAGAGGGGAAAGAGGAAGGTATCGAATCATTCCTCAAAGTGGCTACTGTAGCGTCTCGAGAAGCCGCTATCGCTTGCCTCACTAAGTGCAAGTGGAATCAAGACGACGCCATCAGTTATTTCTTTGGAGATTACACAAAAGCTATTCAAGATAGTCCAAGTCCCGTTAAGGAATCTGCTGAGGCGCTGTCGTCAAGTATGAGTTCGATTCTGCTGACGAATTCGCCTGAAGAGCAACTGTCTCGGTTGAAAGAGGAGATTGTCAAATCATTCTGCGATGTGGTTATTGTAGCGTCTCGAAAAGACGCAGAAGCTTGCCTCAGTCACTGCAAGTGGAATCAAGAAGACGCCATCCGTTATTTCTTTGGAGATTACACAGAAGCTAATCCTGAAATTGCGTGGTCTCAGGCAGGTGAGAGTCAGCCCTTTCAGAATGAAACAAATGCAGATCAGAGCTGCTCTATACCTGGTGATCACGCTGGTCACCTTCCCTCTGAACAGCGGTCCAAAGATTTTCCTCCCCAAGACAGCAGTACCAGTGAGAGCCAGTTGGGTGAGCGAAGAAACAACAATAATCCAGAGGGTGCCCGCAGTAACAGAACACCTGAGAAATCAGTTTCTGGTTCTGGTCATGGAGACATCAAAGAAGGTGGCGGTGGAACCTCGGCCTCGAAGACTGTTGCTGAGAATGAAAGGCAAGTCAGTCAAATTTCTGGTGAAACAAAATCTGAAAGCGCTTTTGGGCAGTCGGATTCTAGAAGAATTTCAGAGAGCGGCCCAGCTACACCGACGTCAACTCGTCCTGGACTATCACCAAGCTCGCCAATTAGTTCGTTGCCCTCATCAGAAAAGTCGACTCTTAACCCGAATGCAAAGTTTGAACAGTTTAAGGCTACAATGAATGTGGAAGATGGAAGCTTGAAGAGGCGTTCACGTGATAGTTTAGTGTACCTCACGACATGTATGATTGGGCATCTCGTGGAAGCATATCTAAAAAATGGATCGGTTTATAGTGGTATATTTCATGCTGCTCATGTGGAGAAGGATTTTGGAATTGTTCTAAAGATGGCATCCCTGGTTAAAGACGGTACTTTACGAGGGCATAAATCTCGTTCCGAGTTCGTCAGAAAGCCACCTTATAAGACATTCATTATTACTGGGGATGAGCTTGTGCAAGTTGTAGCTAAGGATCTCTCCGTATTCAGTGACGGCAAGTTAAAAGCCGTTCAGAGTGAGAAGTCGGTGGAGCTTTTGACGGATTCTTCTATATCAAAGTCCTGTCGTGTTGATCAGGGAAGAGAGCTAAAACACTGGGTACCTGATGGTCAAGCTCCTGAGGGTCTGGATAATGTGTTTGATAAGCCTTGGAAACGTGGGGGATGGGATCAGTTTAAGGTGAATCAGGAACGGTTTGGAGTAATGAGCACCTTCAATGAGGAAATGTATACCACACCACTTGACAGAGGTCTTTGGACTAGAGAGCTGGAAGAGAAAGCCAGAGAGATTGCGAGAGAGATTGAGGGTGAAAATACCGGAGATCTTCATGTAGCAGAGGAAAGAGGCCTTCAAGTTAATGAGAAATTTGATACTGACGAGGAAGCTAAATACTCAGCTGTCCGTCGAGTTGATGGATTTGATGATAGTGGGTTTGATGAGGAAGACGACAAATTGCTGGACACTTGCAACGATCAGACTTTCGGTGGTTCATCTACTTCTATTGTCCAGAAGCCAGCTTCTTCTGGTGGCCAGAAGCCAACTTCTTCTAGTGGCAAGGGTTATGGGGGTGAGAGCTGCTCGATATCTGATGATCACGCTGGTCACCTTCCCTCTGAACAGCGATCCAAGTATTTTCCTGCCCGAGGCAGCAGTATAAGTGAGAGCCAGTTGGGTGAGCGAAGAAACAACAATAATCCAGAGGTTGCCCGCAGTAACAGATCACCTGAGGTATCAGTTTCTGGTCATGGAGATATCGAAGAAGGTGCAAATCTTGGTGGCGGTGGAACCTCCTCGGCTTCGATGACTGTTGCTGAGAAAGAAAGGCAAGTCAATCAAGTTTCTGGTGAAAGAAAATCTGAAAGCTCTTTTGGTCAGTCGGCTTCTAGAAGAGGTTCAGAGAGCGGCCCAGCTCCGTCGGCCTCAACTCGTCCTGGACTATCATCACCAAGCTCGTCAATTAGTTCGTTGCCCTCATCCGAAAAGTCCATTCTTAACCCGAATGCAAAGGAATTCAAACCATCGCAATCACCAGCTCCTGTACGGCCTCAATCTCCAATTGCAGGTGGCTCATTCTACTACGCTGCTCCAACTCCACCGGTGCAGCAGATGCCTGTAATGCCTGCTGGTTACGGAATTCAACCGCAATATCCTGGACAGCAGCAGCTGCTTCGTTATCCTGGCCACGAGTATCCTCAAACTTATTATCCTCCAAATGCACCGCCCCAGTATCAGCAGTGGCAGCAGCTGATGATGCAAGGTCAGGAGCTGATGATGCAAGGTCAGTATCCTAGGCCGCCGGATATGATTTACATGCCGCTGCCTCCTCCTTACCAACCGGGAAATCCACATAATCAAGGATGA
Protein:  
MNGEDGSLKRHSRDSLVYLTTCMIGHLVEAHLKNGSVYSGIFHAADVEKDFGIVLKMASLVKDGTLPGHKSRSQFVRKPPYKTFIIPADELVQVVAKDLSVVSDGKLNAVQSDKSGELLTDSSISKSCRVVQRSERKPRVLDGEAPEGLDNVFDESCRSEEQVLKATPLMVSSQLKVQESTSLVQTVEEKNSPGKESAEASPSSMSSSQLTYTPEEGKEEGIESFLKVATVASREAAIACLTKCKWNQDDAISYFFGDYTKAIQDSPSPVKESAEALSSSMSSILLTNSPEEQLSRLKEEIVKSFCDVVIVASRKDAEACLSHCKWNQEDAIRYFFGDYTEANPEIAWSQAGESQPFQNETNADQSCSIPGDHAGHLPSEQRSKDFPPQDSSTSESQLGERRNNNNPEGARSNRTPEKSVSGSGHGDIKEGGGGTSASKTVAENERQVSQISGETKSESAFGQSDSRRISESGPATPTSTRPGLSPSSPISSLPSSEKSTLNPNAKFEQFKATMNVEDGSLKRRSRDSLVYLTTCMIGHLVEAYLKNGSVYSGIFHAAHVEKDFGIVLKMASLVKDGTLRGHKSRSEFVRKPPYKTFIITGDELVQVVAKDLSVFSDGKLKAVQSEKSVELLTDSSISKSCRVDQGRELKHWVPDGQAPEGLDNVFDKPWKRGGWDQFKVNQERFGVMSTFNEEMYTTPLDRGLWTRELEEKAREIAREIEGENTGDLHVAEERGLQVNEKFDTDEEAKYSAVRRVDGFDDSGFDEEDDKLLDTCNDQTFGGSSTSIVQKPASSGGQKPTSSSGKGYGGESCSISDDHAGHLPSEQRSKYFPARGSSISESQLGERRNNNNPEVARSNRSPEVSVSGHGDIEEGANLGGGGTSSASMTVAEKERQVNQVSGERKSESSFGQSASRRGSESGPAPSASTRPGLSSPSSSISSLPSSEKSILNPNAKEFKPSQSPAPVRPQSPIAGGSFYYAAPTPPVQQMPVMPAGYGIQPQYPGQQQLLRYPGHEYPQTYYPPNAPPQYQQWQQLMMQGQELMMQGQYPRPPDMIYMPLPPPYQPGNPHNQG